List_of_sequenced_plastomes

List of sequenced plastomes

List of sequenced plastomes

List of plastid genomes whose DNA sequence is known

A plastome is the genome of a plastid, a type of organelle found in plants and in a variety of protoctists. The number of known plastid genome sequences grew rapidly in the first decade of the twenty-first century. For example, 25 chloroplast genomes were sequenced for one molecular phylogenetic study.[1]

The 156 kb plastome gene map of Nicotiana tabacum.
The 154 kb plastid genome map of a model flowering plant (Arabidopsis thaliana: Brassicaceae).
The highly reduced, 27 kb plastome map of the parasitic Hydnora visseri.

The flowering plants are especially well represented in complete chloroplast genomes. As of January, 2017, all of their orders are represented except Commelinales, Picramniales, Huerteales, Escalloniales, Bruniales, and Paracryphiales.

A compilation of all available complete plastid genomes is maintained by the NCBI in a public repository.[2]

Plants

Bryophytes s.l.

More information Species, Variety ...

Ferns and Lycophytes

More information Species, Variety ...
More information Species, Variety ...

Gymnosperms

More information Species, Variety ...

Flowering plants

This sortable table is expected to compile complete plastid genomes representing the largest range of sizes, number of genes, and angiosperm families.

More information Species, Size (bp) ...
More information Species, Size (bp) ...

Green algae

More information Species, Variety ...

Red algae

More information Species, Variety ...

Glaucophytes

More information Species, Variety ...

Meta-algae and apicomplexans

Meta-algae are organisms with photosynthetic organelles of secondary or tertiary endosymbiotic origin, and their close non-photosynthetic, plastid-bearing, relatives. Apicomplexans are a secondarily non-photosynthetic group of chromalveoates which retain a reduced plastid organelle.

Photosynthetic chromalveolates

Dinoflagellate plastid genomes are not organised into a single circular DNA molecule like other plastid genomes, but into an array of mini-circles.

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Chlorarachniophytes

More information Species, Variety ...

Euglenophytes

More information Species, Variety ...

Apicomplexans

More information Species, Variety ...

Nucleomorph genomes

In some photosynthetic organisms that ability was acquired via symbiosis with a unicellular green alga (chlorophyte) or red alga (rhodophyte). In some such cases not only does the chloroplast of the former unicellular alga retain its own genome, but a remnant of the alga is also retained. When this retains a nucleus and a nuclear genome it is termed a nucleomorph.

More information Species, Variety ...

Cyanelle genomes

The unicellular eukaryote Paulinella chromatophora possesses an organelle (the cyanelle) which represents an independent case of the acquisition of photosynthesis by cyanobacterial endosymbiosis. (Note: the term cyanelle is also applied to the plastids of glaucophytes.)

More information Species, Variety ...

See also

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