Staggered_extension_process

Staggered extension process

Staggered extension process

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The staggered extension process (also referred to as StEP) is a common technique used in biotechnology and molecular biology to create new, mutated genes with qualities of one or more initial genes.

The technique itself is a modified polymerase chain reaction with very short (approximately 10 seconds) cycles. In these cycles the elongation of DNA is very quick (only a few hundred base pairs) and synthesized fragments anneal with complementary fragments of other strands. In this way, mutations of the initial genes are shuffled and in the end genes with new combinations of mutations are amplified.[1][2]

The StEP protocol has been found to be useful as a method of directed evolution for the discovery of enzymes useful to industry.[3]

References

  1. [1]
    Zhao, Huimin; Giver, Lori; Shao, Zhixin; Affholter, Joseph A.; Arnold, Frances H. (1998). "Molecular evolution by staggered extension process (StEP) in vitro recombination". Nature Biotechnology. 16 (3): 258–261. doi:10.1038/nbt0398-258. PMID 9528005. S2CID 20490024.
  2. [2]
    Zhao, Huimin; Zha, Wenjuan (1 November 2006). "In vitro 'sexual' evolution through the PCR-based staggered extension process (StEP)". Nature Protocols. 1 (4): 1865–1871. doi:10.1038/nprot.2006.309. PMID 17487170. S2CID 15317544.
  3. [3]
    Marrs, Barry; Delagrave, Simon; Murphy, Dennis (29 July 1999). "Novel approaches for discovering industrial enzymes". Current Opinion in Microbiology. 2 (3): 241–245. doi:10.1016/S1369-5274(99)80042-3. PMID 10383866.
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